I have a shapefile containing polygons and a shapefile containing points. Now I would like to select the polygons that contain points.
How can I do this from the command line using ogr2ogr?
Answer
At the following link all SQL functions that test spatial relationships are described: http://www.gaia-gis.it/spatialite-2.4.0/spatialite-sql-2.4.html#p12.
The following spatial relationships can be used within a query
ST_Equals - ST_Disjoint - ST_Touches - ST_Within - ST_Overlaps - ST_Crosses - ST_Intersects - ST_Contains - ST_Relate
For this type of request you can do this using the ST_Containts query of sqlite. Which can be adopted in a ogr2ogr command as follows:
ogr2ogr -f "ESRI Shapefile" selection_polygon.shp shapefile_polygon.shp -dialect sqlite -sql "SELECT polygon.Geometry, polygon.id FROM shapefile_polygon polygon, 'shapefile_point.shp'.shapefile_point point WHERE ST_Contains(polygon.geometry, point.geometry) GROUP BY polygon.id"
Example
Picture of shapefile_polygon.shp and shapefile_point.shp:
And picture of selection_polygon.shp and shapefile_point.shp: 
Expanded options of the spatial relationships:
ST_EqualsReturns true if the interior and the boundary of the two geometries are spatially equalST_DisjointReturns true if the boundaries and interior do not intersectST_TouchesReturns true if the boundaries intersect but the interiors do notST_WithinReturns true if the interior of the given geometry does not intersect with the exterior of another geometryST_OverlapsReturns true if the interiors of two geometries have non-empty intersectionST_CrossesReturns true if the interiors of the geometries intersect but the boundaries do notST_IntersectsReturns true if the interiors of the geometries intersectST_ContainsTests if the given geometry contains another geometryST_RelateReturns true if this geometry is spatially related to another geometry
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